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# Copyright (C) 2003 by Intevation GmbH |
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# Authors: |
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# Bernhard Herzog <[email protected]> |
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# |
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# This program is free software under the GPL (>=v2) |
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# Read the file COPYING coming with the software for details. |
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"""Database for transient data |
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This database is intended for data representations needed during the |
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lifetime of a Thuban session but which is not permanent. Examples of |
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this are for instance a join of two DBF files where the DBF files are |
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the permanent representation of the data and the join only exists in the |
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Thuban session and is reconstructed when the session is opened. |
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""" |
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__version__ = "$Revision$" |
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# $Source$ |
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# $Id$ |
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import os |
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import weakref |
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from sqlite import connect |
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import table |
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sql_type_map = { |
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table.FIELDTYPE_INT: "INTEGER", |
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table.FIELDTYPE_STRING: "VARCHAR", |
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table.FIELDTYPE_DOUBLE: "FLOAT", |
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} |
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type_converter_map = { |
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table.FIELDTYPE_INT: int, |
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table.FIELDTYPE_STRING: str, |
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table.FIELDTYPE_DOUBLE: float, |
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} |
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class TransientDatabase: |
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def __init__(self, filename): |
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self.filename = filename |
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self.conn = connect(filename) |
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# Counters to produce unique table and column names |
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self.num_tables = 0 |
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self.num_cols = 0 |
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# Since there's only once process using the SQLite database, we |
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# might be able to get a tad more speed with default_synchronous |
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# OFF. So far I haven't seen any measurable speedup, though. |
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#self.execute("PRAGMA default_synchronous = OFF") |
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def __del__(self): |
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self.close() |
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def close(self): |
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if self.conn is not None: |
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self.conn.close() |
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self.conn = None |
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def new_table_name(self): |
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self.num_tables += 1 |
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return "Table%03d" % self.num_tables |
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def new_column_name(self): |
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self.num_cols += 1 |
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return "Col%03d" % self.num_cols |
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def execute(self, *args): |
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"""execute the SQL statement in the database and return the result""" |
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cursor = self.conn.cursor() |
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cursor.execute(*args) |
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result = cursor.fetchone() |
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self.conn.commit() |
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return result |
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def cursor(self): |
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return self.conn.cursor() |
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class ColumnReference: |
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def __init__(self, name, type, internal_name): |
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self.name = name |
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self.type = type |
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self.internal_name = internal_name |
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class TransientTableBase(table.OldTableInterfaceMixin): |
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"""Base class for tables in the transient database""" |
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def __init__(self, transient_db): |
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"""Initialize the table for use with the given transient db""" |
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self.db = transient_db |
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self.tablename = self.db.new_table_name() |
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self.indexed_columns = {} |
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self.read_record_cursor = None |
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self.read_record_last_row = None |
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self.read_record_last_result = None |
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def create(self, columns): |
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self.columns = columns |
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self.name_to_column = {} |
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self.orig_names = [] |
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self.internal_to_orig = {} |
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self.orig_to_internal = {} |
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self.column_map = {} |
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# Create the column objects and fill various maps and lists |
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for index in range(len(self.columns)): |
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col = self.columns[index] |
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self.name_to_column[col.name] = col |
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self.orig_names.append(col.name) |
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self.internal_to_orig[col.internal_name] = col.name |
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self.orig_to_internal[col.name] = col.internal_name |
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self.column_map[col.name] = col |
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self.column_map[index] = col |
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# Build the CREATE TABLE statement and create the table in the |
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# database |
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table_types = ["id INTEGER PRIMARY KEY"] |
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for col in self.columns: |
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table_types.append("%s %s" % (col.internal_name, |
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sql_type_map[col.type])) |
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table_stmt = "CREATE TABLE %s (\n %s\n);" % (self.tablename, |
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",\n ".join(table_types)) |
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self.db.execute(table_stmt) |
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def transient_table(self): |
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""" |
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Return a table whose underlying implementation is in the transient db |
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""" |
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return self |
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def ensure_index(self, column): |
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"""Ensure that there's an index on the given column""" |
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if not column in self.indexed_columns: |
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internal_name = self.orig_to_internal[column] |
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indexname = "Index_%s_%s" % (self.tablename, internal_name) |
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stmt = "CREATE INDEX %s ON %s (%s);" % (indexname, self.tablename, |
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internal_name) |
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self.db.execute(stmt) |
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self.indexed_columns[column] = 1 |
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def NumColumns(self): |
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return len(self.columns) |
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def NumRows(self): |
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result = self.db.execute("SELECT count(*) FROM %s;" % self.tablename) |
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return int(result[0]) |
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def Columns(self): |
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return self.columns |
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def Column(self, col): |
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return self.column_map[col] |
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def HasColumn(self, col): |
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"""Return whether the table has a column with the given name or index |
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""" |
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return self.column_map.has_key(col) |
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def ReadRowAsDict(self, index): |
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# Implementation Strategy: Executing a completely new select |
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# statement every time this method is called is too slow. The |
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# most important usage is to read the records more or less |
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# sequentially. This happens e.g. when drawing a layer with a |
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# classification where the shapes are drawn in order of the |
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# shape ids. Another pattern is that the same row is requested |
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# several times in a row. This happens in the table view, for |
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# instance. |
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# We can exploit this to make access faster by having one cursor |
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# open all the time and keeping the last row read around in case |
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# the same row is accessed again the next time and if the row |
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# index is larger than the row we have read last we simply fetch |
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# rows from the cursor until we've reached the requested row. If |
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# the requested row index is smaller then we start a new cursor. |
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# FIXME: So far this scheme seems to work well enough. Obvious |
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# improvements would be to start the cursor at exactly the |
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# requested row (should be efficient and easy to do now that the |
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# id is the primary key) and to perhaps to also start a new |
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# cursor if the requested index is much larger than the last row |
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# so that we don't read and discard lots of the rows. |
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# Check whether we have to start a new cursor |
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if self.read_record_cursor is None or index <self.read_record_last_row: |
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stmt = ("SELECT %s FROM %s;" |
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% (", ".join([c.internal_name for c in self.columns]), |
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self.tablename)) |
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self.read_record_cursor = self.db.cursor() |
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self.read_record_cursor.execute(stmt) |
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self.read_record_last_row = -1 |
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self.read_record_last_result = None |
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# Now we should have a cursor at a position less than or equal |
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# to the index so the following if statement will always set |
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# result to a suitable value |
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assert index >= self.read_record_last_row |
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if index == self.read_record_last_row: |
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result = self.read_record_last_result |
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else: |
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for i in range(index - self.read_record_last_row): |
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result = self.read_record_cursor.fetchone() |
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self.read_record_last_result = result |
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self.read_record_last_row = index |
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return dict(zip(self.orig_names, result)) |
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def ReadValue(self, row, col): |
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"""Return the value of the specified row and column |
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The col parameter may be the index of the column or its name. |
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""" |
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# Depending on the actual access patterns of the table data, it |
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# might be a bit faster in some circumstances to not implement |
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# this via ReadRowAsDict, but this simple implementation should |
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# be fast enough for most purposes. |
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return self.ReadRowAsDict(row)[self.column_map[col].name] |
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def ValueRange(self, col): |
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col = self.column_map[col] |
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iname = col.internal_name |
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min, max = self.db.execute("SELECT min(%s), max(%s) FROM %s;" |
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% (iname, iname, self.tablename)) |
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converter = type_converter_map[col.type] |
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return (converter(min), converter(max)) |
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def UniqueValues(self, col): |
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iname = self.column_map[col].internal_name |
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cursor = self.db.cursor() |
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cursor.execute("SELECT %s FROM %s GROUP BY %s;" |
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% (iname, self.tablename, iname)) |
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result = [] |
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while 1: |
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row = cursor.fetchone() |
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if row is None: |
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break |
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result.append(row[0]) |
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return result |
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def SimpleQuery(self, left, comparison, right): |
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"""Return the indices of all rows that matching a condition. |
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Parameters: |
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left -- The column object for the left side of the comparison |
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comparison -- The comparison operator as a string. It must be |
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one of '==', '!=', '<', '<=', '>=', '>' |
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right -- The right hand side of the comparison. It must be |
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either a column object or a value, i.e. a string, |
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int or float. |
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The return value is a sorted list of the indices of the rows |
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where the condition is true. |
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""" |
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if comparison not in ("==", "!=", "<", "<=", ">=", ">"): |
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raise ValueError("Comparison operator %r not allowed" % comparison) |
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if hasattr(right, "internal_name"): |
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right_template = right.internal_name |
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params = () |
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else: |
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right_template = "%s" |
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params = (right,) |
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query = "SELECT id FROM %s WHERE %s %s %s ORDER BY id;" \ |
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% (self.tablename, left.internal_name, comparison, |
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right_template) |
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cursor = self.db.cursor() |
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cursor.execute(query, params) |
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result = [] |
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while 1: |
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row = cursor.fetchone() |
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if row is None: |
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break |
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result.append(row[0]) |
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return result |
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def Dependencies(self): |
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"""Placeholder for a method in a derived class. |
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Return a sequence with the tables and other data objects that |
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self depends on. |
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""" |
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raise NotImplementedError |
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class TransientTable(TransientTableBase): |
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"""A Table in a transient DB that starts as the copy of a Thuban Table.""" |
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def __init__(self, transient_db, table): |
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"""Create a new table in the given transient DB as a copy of table |
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The table argument can be any object implementing the Table |
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interface. |
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""" |
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TransientTableBase.__init__(self, transient_db) |
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self.title = table.Title() |
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self.create(table) |
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def Title(self): |
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"""Return the title of the table. |
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The title is the same as that of the original table |
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""" |
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return self.title |
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def create(self, table): |
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columns = [] |
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for col in table.Columns(): |
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columns.append(ColumnReference(col.name, col.type, |
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self.db.new_column_name())) |
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TransientTableBase.create(self, columns) |
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# copy the input table to the transient db |
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# A key to insert to use for the formatting of the insert |
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# statement. The key must not be equal to any of the column |
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# names so we construct one by building a string of x's that is |
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# longer than any of the column names |
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id_key = max([len(col.name) for col in self.columns]) * "x" |
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insert_template = "INSERT INTO %s (id, %s) VALUES (%%(%s)s, %s);" \ |
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% (self.tablename, |
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", ".join([col.internal_name |
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for col in self.columns]), |
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id_key, |
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", ".join(["%%(%s)s" % col.name |
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for col in self.columns])) |
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cursor = self.db.cursor() |
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for i in range(table.NumRows()): |
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row = table.ReadRowAsDict(i) |
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row[id_key] = i |
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cursor.execute(insert_template, row) |
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self.db.conn.commit() |
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class TransientJoinedTable(TransientTableBase): |
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"""A Table in the transient DB that contains a join of two tables""" |
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def __init__(self, transient_db, left_table, left_field, |
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right_table, right_field = None, outer_join = False): |
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"""Create a new table in the transient DB as a join of two tables. |
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Both input tables, left_table and right_table must have a |
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transient_table method that returns a table object for a table |
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in the transient database. The join is performed on the condition |
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that the value of the left_field column the the left table is |
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equal to the value of the right_field in the right_table. |
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The joined table contains all columns of the input tables with |
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one exception: Any column in the right_table with the same name |
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as one of the columns in the left_table will be omitted. This is |
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somewhat of an implementation detail, but is done so that the |
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column names of the joined table can be the same as the column |
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names of the input tables without having to create prefixes. |
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""" |
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TransientTableBase.__init__(self, transient_db) |
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self.dependencies = (left_table, right_table) |
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self.left_table = left_table.transient_table() |
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self.left_field = left_field |
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self.right_table = right_table.transient_table() |
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if right_field: |
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self.right_field = right_field |
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else: |
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self.right_field = self.left_field |
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self.outer_join = outer_join |
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self.create() |
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def Title(self): |
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"""Return the title of the joined table""" |
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return "Join of %(left)s and %(right)s" \ |
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% {"left": self.left_table.Title(), |
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"right": self.right_table.Title()} |
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bh |
765 |
def create(self): |
384 |
|
|
"""Internal: Create the table with the joined data""" |
385 |
|
|
self.tablename = self.db.new_table_name() |
386 |
|
|
|
387 |
|
|
self.right_table.ensure_index(self.right_field) |
388 |
|
|
|
389 |
|
|
# Coalesce the column information |
390 |
|
|
visited = {} |
391 |
|
|
columns = [] |
392 |
|
|
for col in self.left_table.columns + self.right_table.columns: |
393 |
|
|
if col.name in visited: |
394 |
bh |
841 |
# We can't allow multiple columns with the same original |
395 |
|
|
# name, so omit this one. FIXME: There should be a |
396 |
|
|
# better solution. |
397 |
bh |
765 |
continue |
398 |
|
|
columns.append(col) |
399 |
|
|
TransientTableBase.create(self, columns) |
400 |
|
|
|
401 |
|
|
# Copy the joined data to the table. |
402 |
|
|
internal_names = [col.internal_name for col in self.columns] |
403 |
frank |
1009 |
if self.outer_join: |
404 |
|
|
join_operator = 'LEFT OUTER JOIN' |
405 |
|
|
else: |
406 |
|
|
join_operator = 'JOIN' |
407 |
bh |
841 |
stmt = ("INSERT INTO %s (id, %s) SELECT %s.id, %s FROM %s" |
408 |
frank |
1009 |
" %s %s ON %s = %s;" |
409 |
bh |
841 |
% (self.tablename, |
410 |
|
|
", ".join(internal_names), |
411 |
|
|
self.left_table.tablename, |
412 |
|
|
", ".join(internal_names), |
413 |
|
|
self.left_table.tablename, |
414 |
frank |
1009 |
join_operator, |
415 |
bh |
841 |
self.right_table.tablename, |
416 |
|
|
self.orig_to_internal[self.left_field], |
417 |
|
|
self.orig_to_internal[self.right_field])) |
418 |
bh |
765 |
self.db.execute(stmt) |
419 |
|
|
|
420 |
bh |
984 |
def Dependencies(self): |
421 |
|
|
"""Return a tuple with the two tables the join depends on.""" |
422 |
|
|
return self.dependencies |
423 |
bh |
765 |
|
424 |
bh |
984 |
|
425 |
bh |
818 |
class AutoTransientTable(table.OldTableInterfaceMixin): |
426 |
bh |
765 |
|
427 |
|
|
"""Table that copies data to a transient table on demand. |
428 |
|
|
|
429 |
|
|
The AutoTransientTable takes another table as input and copies data |
430 |
|
|
to a table in a TransientDatabase instance on demand. |
431 |
|
|
""" |
432 |
|
|
|
433 |
|
|
def __init__(self, transient_db, table): |
434 |
|
|
self.transient_db = transient_db |
435 |
|
|
self.table = table |
436 |
|
|
self.t_table = None |
437 |
|
|
|
438 |
bh |
998 |
def Title(self): |
439 |
|
|
"""Return the title of the table. |
440 |
|
|
|
441 |
|
|
The title is the same as that of the original table. |
442 |
|
|
""" |
443 |
|
|
return self.table.Title() |
444 |
|
|
|
445 |
bh |
818 |
def Columns(self): |
446 |
|
|
return self.table.Columns() |
447 |
bh |
765 |
|
448 |
bh |
818 |
def Column(self, col): |
449 |
|
|
return self.table.Column(col) |
450 |
bh |
765 |
|
451 |
bh |
839 |
def HasColumn(self, col): |
452 |
|
|
"""Return whether the table has a column with the given name or index |
453 |
|
|
""" |
454 |
|
|
return self.table.HasColumn(col) |
455 |
|
|
|
456 |
bh |
818 |
def NumRows(self): |
457 |
|
|
return self.table.NumRows() |
458 |
bh |
765 |
|
459 |
bh |
818 |
def NumColumns(self): |
460 |
|
|
return self.table.NumColumns() |
461 |
bh |
765 |
|
462 |
bh |
818 |
def ReadRowAsDict(self, record): |
463 |
bh |
765 |
"""Return the record no. record as a dict mapping field names to values |
464 |
|
|
""" |
465 |
|
|
if self.t_table is not None: |
466 |
bh |
839 |
return self.t_table.ReadRowAsDict(record) |
467 |
bh |
765 |
else: |
468 |
bh |
818 |
return self.table.ReadRowAsDict(record) |
469 |
bh |
765 |
|
470 |
bh |
849 |
def ReadValue(self, row, col): |
471 |
|
|
"""Return the value of the specified row and column |
472 |
|
|
|
473 |
|
|
The col parameter may be the index of the column or its name. |
474 |
|
|
""" |
475 |
|
|
if self.t_table is not None: |
476 |
|
|
return self.t_table.ReadValue(row, col) |
477 |
|
|
else: |
478 |
|
|
return self.table.ReadValue(row, col) |
479 |
|
|
|
480 |
bh |
765 |
def copy_to_transient(self): |
481 |
|
|
"""Internal: Create a transient table and copy the data into it""" |
482 |
|
|
self.t_table = TransientTable(self.transient_db, self) |
483 |
|
|
|
484 |
|
|
def transient_table(self): |
485 |
|
|
""" |
486 |
|
|
Return a table whose underlying implementation is in the transient db |
487 |
|
|
""" |
488 |
|
|
if self.t_table is None: |
489 |
|
|
self.copy_to_transient() |
490 |
|
|
return self.t_table |
491 |
|
|
|
492 |
bh |
818 |
def ValueRange(self, col): |
493 |
bh |
765 |
if self.t_table is None: |
494 |
|
|
self.copy_to_transient() |
495 |
bh |
839 |
return self.t_table.ValueRange(col) |
496 |
bh |
765 |
|
497 |
bh |
839 |
def UniqueValues(self, col): |
498 |
bh |
765 |
if self.t_table is None: |
499 |
|
|
self.copy_to_transient() |
500 |
bh |
839 |
return self.t_table.UniqueValues(col) |
501 |
bh |
844 |
|
502 |
|
|
def SimpleQuery(self, left, comparison, right): |
503 |
|
|
if self.t_table is None: |
504 |
|
|
self.copy_to_transient() |
505 |
|
|
# Make sure to use the column object of the transient table. The |
506 |
|
|
# left argument is always a column object so we can just ask the |
507 |
|
|
# t_table for the right object. |
508 |
jonathan |
933 |
if hasattr(right, "name"): |
509 |
|
|
return self.t_table.SimpleQuery(self.t_table.Column(left.name), |
510 |
|
|
comparison, |
511 |
|
|
self.t_table.Column(right.name)) |
512 |
|
|
else: |
513 |
|
|
return self.t_table.SimpleQuery(self.t_table.Column(left.name), |
514 |
|
|
comparison, right) |
515 |
bh |
984 |
|
516 |
|
|
def Dependencies(self): |
517 |
|
|
"""Return a tuple containing the original table""" |
518 |
|
|
return (self.table,) |